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Bioinformatics Publications

68 (of 68 /dk/atira/pure/researchoutput/status/published available) for St Andrews Bioinformatics Unit. (source: University of St Andrews PURE)
Please click title of any item for full details

Protocol for an interdisciplinary cross-sectional study investigating the social, biological and community-level drivers of antimicrobial resistance (AMR) Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Katherine Lisa Keenan, Mike Kesby, Joseph R. Mwanga, Derek James Sloan, Blandina T. Mmbaga, V Anne Smith, Stephen Henry Gillespie, Andy Lynch, Alison Fiona Sandeman, John Stelling, Alison Elliott, David M. Aanensen, Gibson E. Kibiki, Wilber Sabiiti, Matthew Holden,
BMJ Open 2021 vol. 11
Cyclic oligoadenylate signaling and regulation by ring nucleases during type III CRISPR defense Januka Sahan Athukoralage, Malcolm White
RNA 2021 vol. 27 pp. 855-867
A neglected conceptual problem regarding phenotypic plasticity’s role in adaptive evolution Nathan William Bailey, Camille Desjonqueres, Jack Gregory Rayner, Xiao Zhang
Evolution Letters 2021 vol. 5 pp. 444-457
The distinction between repeatability and correlation in studies of animal behaviour Miguel Borges Da Costa Guint Barbosa, Michael Blair Morrissey
Animal Behaviour 2021 vol. 175 pp. 201-217
Rationally designed mariner vectors for functional genomic analysis of Actinobacillus pleuropneumoniae and other Pasteurellaceae species by transposon-directed insertion-site sequencing (TraDIS) Janine T. Bossé, Yanwen Li, Leon G. Leanse, Liqing Zhou, Roy R. Chaudhuri, Sarah E. Peters, Jinhong Wang, Gareth A. Maglennon, Matthew Holden, Duncan J. Maskell, Alexander W. Tucker, Brendan W. Wren, Andrew N. Rycroft, Paul R. Langford, Alexander W. (. Dan) Tucker, Lucy A. Weinert, Jinhong (. Tracy) Wang, Shi-Lu Luan, Jessica Beddow, Jon Cuccui, Vanessa S. Terra, on behalf of the BRaDP1T consortium
Animal Diseases 2021 vol. 1
Speciation in the deep Emma Louise Carroll, Michael R. McGowen, Morgan L. McCarthy, Felix G. Marx, Natacha Aguilar, Merel L. Dalebout, Sascha Dreyer, Oscar Eduardo Gaggiotti, Sabine S. Hansen, Anton van Helden, Aubrie Onoufriou, Robin W. Baird, C. Scott Baker, Simon Berrow, Danielle Cholewiak, Rochelle Constantine, Nicholas J. Davison, Catarina Eira, R. Ewan Fordyce, John Gatesy, G. J. Greg Hofmeyr, Vidal Martín, James G. Mead, Antonio A. Mignucci-Giannoni, Phillip A. Morin, Cristel Reyes, Emer Rogan, Massimiliano Rosso, Mark S. Springer, Debbie Steel, Morten Tange Olsen
Proceedings of the Royal Society B: Biological Sciences 2021 vol. 288
Impacts of jellyfish on marine cage aquaculture Morag Clinton, David Ellard Keith Ferrier, Samuel A M Martin, Andrew Stuart Brierley
ICES Journal of Marine Science 2021 vol. 78 pp. 1557–1573
Sampling the fish gill microbiome Morag Clinton, Samuel A. M. Martin, Andrew Stuart Brierley, David Ellard Keith Ferrier
BMC Microbiology 2021 vol. 21
Genome expression dynamics reveal the parasitism regulatory landscape of the root-knot nematode Meloidogyne incognita and a promoter motif associated with effector genes Martine Da Rocha, Caroline Bournaud, Julie Dazenière, Peter Jacob Thorpe, Marc Bailly-Bechet, Clément Pellegrin, Arthur Péré, Priscila Grynberg, Laetitia Perfus-Barbeoch, Sebastian Eves-van den Akker, Etienne G. J. Danchin
Genes 2021 vol. 12
Re-identification of individuals from images using spot constellations Ignacy T. De¸bicki, Lizy Mittell, Bjarni K. Kristjánsson, Camille A. Leblanc, Michael Blair Morrissey, Kasim Terzic
Royal Society Open Science 2021 vol. 8
A genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows Nicolas Dussex, Verena E. Kutschera, Gavin R. Hunt, Russell D. Gray, Kim Rutherford, Hideaki Abe, Robert C. Fleischer, Michael Gordon Ritchie, Christian Rutz, Jochen B.Wolf, Neil J. Gemmell
Molecular Ecology 2021 vol. 30 pp. 973-986
DrosoPhyla Cédric Finet, Victoria A Kassner, Antonio B Carvalho, Henry Chung, Jonathan P Day, Stephanie Day, Emily K Delaney, Francine C De Ré, Héloïse D Dufour, Eduardo Dupim, Hiroyuki F Izumitani, Thaísa B Gautério, Jessa Justen, Toru Katoh, Artyom Kopp, Shigeyuki Koshikawa, Ben Longdon, Elgion L Loreto, Maria D S Nunes, Komal K B Raja, Mark Rebeiz, Michael Gordon Ritchie, Gayane Saakyan, Tanya Sneddon, Machiko Teramoto, Venera Tyukmaeva, Thyago Vanderlinde, Emily E Wey, Thomas Werner, Thomas M Williams, Lizandra J Robe, Masanori J Toda, Ferdinand Marlétaz
Genome Biology and Evolution 2021 vol. 13
PHYTO-THREATS Sarah Green, David E. L. Cooke, Mike Dunn, Louise Barwell, Bethan Purse, Daniel S. Chapman, Gregory Valatin, Alexandra Schlenzig, Jane Barbrook, Tim Pettitt, Colin Price, Ana Pérez-Sierra, Debra Frederickson-Matika, Leighton Pritchard, Peter Jacob Thorpe, Peter J. A. Cock, Eva Randall, Beatrix Keillor, Mariella Marzano
Forests 2021 vol. 12
The role of multidimensional poverty in antibiotic misuse Dominique LaShari Green, Katherine Lisa Keenan, Sarah Insia Huque, Mike Kesby, Martha F. Mushi, Catherine Kansiime, Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Joseph R. Mwanga, Andy Lynch, Hannah Worthington, Emmanuel Olawale Olamijuwon, Mary Abed Al Ahad, Annette Aduda, Blandina T. Mmbaga, Joel Bazira, Alison Fiona Sandeman, John Stelling, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiti, Derek James Sloan, Matthew Holden, Hatua Consortium
SSRN Electronic Journal 2021
Neuroanatomy of the grey seal brain Nienke Hoeksema, Laura Verga, Janine Mengede, Corné van Roessel, Stella Villanueva, Anna Salazar-Casals, Ana Rubio-Garcia, Branislava Ćurčić-Blake, Sonja Vernes, Andrea Ravignani
Philosophical Transactions of the Royal Society B: Biological Sciences 2021 vol. 376
Animal personality adds complexity to the processes of divergence between sympatric morphs of Arctic charr Quentin J.-B. Horta-Lacueva, David Benhaïm, Michael Blair Morrissey, Sigurður S. Snorrason, Kalina H. Kapralova
Animal Behaviour 2021 vol. 175 pp. 57-73
Multivariate analysis of morphology, behaviour, growth and developmental timing in hybrids brings new insights into the divergence of sympatric Arctic charr morphs Quentin J.-B. Horta-Lacueva, Sigurður S. Snorrason, Michael Blair Morrissey, Camille A.-L. Leblanc, Kalina H. Kapralova
BMC Ecology and Evolution 2021 vol. 21
Genomic surveillance of Neisseria gonorrhoeae in the Philippines, 2013-2014 Manuel C Jamoralin, Silvia Argimón, Marietta L Lagrada, Alfred S Villamin, Melissa L Masim, June M Gayeta, Karis D Boehme, Agnettah M Olorosa, Sonia B Sia, Charmian M Hufano, Victoria Cohen, Lara T Hernandez, Benjamin Jeffrey, Khalil Abudahab, John Stelling, Matthew Holden, David M Aanensenb, Celia C Carlosa
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 17-25
Toward genetic modification of plant-parasitic nematodes Olaf Kranse, Helen Beasley, Sally Adams, Andre Pires-daSilva, Christopher Bell, Catherine J Lilley, Peter E Urwin, David Bird, Eric Miska, Geert Smant, Godelieve Gheysen, John Jones, Mark Viney, Pierre Abad, Thomas R Maier, Thomas J Baum, Shahid Siddique, Valerie Williamson, Alper Akay, Sebastian Eves-van den Akker
G3: Genes, Genomes, Genetics 2021 vol. 11
Hearing sensitivity and amplitude coding in bats are differentially shaped by echolocation calls and social calls Ella Z Lattenkamp, Martina Nagy, Markus Drexl, Sonja Vernes, Lutz Wiegrebe, Mirjam Knörnschild
Proceedings of the Royal Society B: Biological Sciences 2021 vol. 288
The vocal development of the pale spear-nosed bat is dependent on auditory feedback Ella Z. Lattenkamp, Meike Linnenschmidt, Eva Mardus, Sonja Vernes, Lutz Wiegrebe, Michael Schutte
Philosophical Transactions of the Royal Society B: Biological Sciences 2021 vol. 376
Selection on ancestral genetic variation fuels repeated ecotype formation in bottlenose dolphins Marie Louis, Marco Galimberti, Frederick Archer, Simon Berrow, Andrew Brownlow, Ramon Fallon, Milaja Nykänen, Joanne O'Brien, Kelly Robertson, Patricia E. Rosel, Benoit Simon-Bouhet, Daniel Wegmann, Michael Fontaine, Andrew Foote, Oscar Eduardo Gaggiotti
Science Advances 2021 vol. 7
Cooperative coinfection dynamics on clustered networks P. Mann, V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
Exact formula for bond percolation on cliques V Anne Smith, John B. O. Mitchell, Christopher Anthony Jefferson, Simon Andrew Dobson
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics 2021 vol. 104
Percolation in random graphs with higher-order clustering V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
Random graphs with arbitrary clustering and their applications V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
Symbiotic and antagonistic disease dynamics on clustered networks using bond percolation V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 104
Two-pathogen model with competition on clustered networks V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
A rare missense variant in the ATP2C2 gene is associated with language impairment and related measures Angela Martinelli, Mabel Rice, Joel B. Talcott, Shelley Smith, Muhammad Hashim Raza, Margaret J. Snowling, Charles Hulme, John Stein, Marianna E. Hayiou-Thomas, Ziarih Hawi, Lindsey Kent, Samantha J. Pitt, Dianne F. Newbury, Silvia Paracchini
Human Molecular Genetics 2021 vol. 30 pp. 1160–1171
Real-time imaging of cellular forces using optical interference Nils Michael Kronenberg, Andrew Morton, Jan Murawski, Simon John Powis, Malte Christian Gather
Nature Communications 2021 vol. 12
Bayesian Network Analysis reveals resilience of the jellyfish Aurelia aurita to an Irish Sea regime shift Emily G. Mitchell, Margaret Isabel Wallace, V Anne Smith, Amanda A. Wiesenthal, Andrew Stuart Brierley
Scientific Reports 2021 vol. 11
Dispensing antibiotics without prescription at the community pharmacies and accredited drug dispensing outlets in Tanzania Pendo M. Ndaki, Martha F. Mushi, Joseph R. Mwanga, Eveline T. Konje, Nyanda E. Ntinginya, Blandina T. Mmbaga, Katherine Lisa Keenan, Wilber Sabiiti, Mike Kesby, Manuel Fernando Benitez Paez, Alison Fiona Sandeman, Matthew Holden, Stephen E. Mshana,
Antibiotics 2021 vol. 10
Plasmodium knowlesi – clinical isolate genome sequencing to inform translational same-species model system for severe malaria Cyrus John Daneshvar, Janet Cox-Singh
Frontiers in Cellular and Infection Microbiology 2021 vol. 11
Hand preference and mathematical learning difficulties: New data from Greece, the United Kingdom, and Germany and two meta-analyses of the literature Marietta Papadatou-Pastou, Despoina-Athanasia Panagiotidou, Ursula Fischer, Silvia Paracchini, Giannis Karagiannakis
Laterality 2021 vol. Latest Articles
Handedness in Twins: Meta-Analyses Silvia Paracchini
PsyArXiv 2021
Recent advances in handedness genetics Silvia Paracchini
Symmetry 2021 vol. 13
Clinical perspectives in integrating whole genome sequencing into the investigation of healthcare and public health outbreaks – hype or help? Stephen Henry Gillespie, Kerry A. Pettigrew, Matthew Holden
Journal of Hospital Infection 2021 vol. 109 pp. 1-9
Sex-specific responses to cold in a very cold-tolerant, northern Drosophila species Tapio Envall, Michael Gordon Ritchie, Maaria Kankare
Heredity 2021 vol. 126 pp. 695–705
Editorial: Cytomegalovirus pathogenesis and host interactions Emma L. Poole, Michael Martin Nevels
Frontiers in Cellular and Infection Microbiology 2021 vol. 11
Potato cyst nematodes Globodera rostochiensis and G. pallida James Alexander Price, Danny Coyne, Vivian C. Blok, John Jones
Molecular Plant Pathology 2021 vol. 22 pp. 495-507
Variable dosage compensation is associated with female consequences of an X-linked, male-beneficial mutation Jack Gregory Rayner, Nathan William Bailey
Proceedings of the Royal Society of London Series B: Biological Sciences 2021 vol. 288
Hyperkinetic stereotyped movements in a boy with biallelic CNTNAP2 variants Marcello Scala, Midas Anijs, Roberta Battini, Francesca Madia, Valeria Capra, Paolo Scudieri, Alberto Verrotti, Federico Zara, Carlo Minetti, Sonja Vernes, Pasquale Striano
Italian Journal of Pediatrics 2021 vol. 47
Draft genome assemblies for tree pathogens Phytophthora pseudosyringae and Phytophthora boehmeriae Peter Jacob Thorpe, Ramesh R Vetukuri, Pete E Hedley, Jenny Morris, Maximilian A Whisson, Lydia R J Welsh, Stephen C Whisson
G3: Genes, Genomes, Genetics 2021 vol. 11
The multi-dimensional nature of vocal learning Sonja Vernes, Buddhamas (Pralle) Kriengwatana, Veronika Beeck, Julia Fischer, Peter Lloyd Tyack, Carel ten Cate, Vincent Janik
Philosophical Transactions of the Royal Society. B, Biological Sciences 2021 vol. 376
Vocal learning in animals and humans Sonja Vernes, Vincent Janik, William Tecumseh Sherman Fitch, Peter James Bramwell Slater
Philosophical Transactions of the Royal Society. B, Biological Sciences 2021 vol. 376
The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe Megan A. Wallace, Kelsey A. Coffman, Clément Gilbert, Sanjana Ravindran, Gregory F. Albery, Jessica Abbott, Eliza Argyridou, Paola Bellosta, Andrea J. Betancourt, Hervé Colinet, Katarina Eric, Amanda Glaser-Schmitt, Sonja Grath, Mihailo Jelic, Maaria Kankare, Iryna Kozeretska, Volker Loeschcke, Catherine Montchamp-Moreau, Lino Ometto, Banu Sebnem Onder, Dorcas J. Orengo, John Parsch, Marta Pascual, Aleksandra Patenkovic, Eva Puerma, Michael Gordon Ritchie, Omar Rota-Stabelli, Mads Fristrup Schou, Svitlana Serga, Marina Stamenkovic-Radak, Marija Tanaskovic, Marija Savic Veselinovic, Jorge Vieira, Cristina P. Vieira, Martin Kapun, Thomas Flatt, Josefa González, Fabian Staubach, Darren J. Obbard
Virus Evolution 2021 vol. 7
Cold adaptation drives population genomic divergence in the ecological specialist, Drosophila montana Venera Tyukmaeva, Anneli Hoikkala, Michael Gordon Ritchie, Maaria Kankare
Molecular Ecology 2021 vol. 30 pp. 3783-3796
Experimental evolution supports signatures of sexual selection in genomic divergence Paris Veltsos, Rhonda Snook, Michael Gordon Ritchie
Evolution Letters 2021 vol. 5 pp. 214-229
DNA methylation predicts age and provides insight into exceptional longevity of bats Gerald S. Wilkinson, Danielle M. Adams, Amin Haghani, Ake T. Lu, Joseph Zoller, Charles E. Breeze, Bryan D. Arnold, Hope C. Ball, Gerald G. Carter, Lisa Noelle Cooper, Dina K. N. Dechmann, Paolo Devanna, Nicolas J. Fasel, Alexander V. Galazyuk, Linus Günther, Edward Hurme, Gareth Jones, Mirjam Knörnschild, Ella Z. Lattenkamp, Caesar Z. Li, Frieder Mayer, Josephine A. Reinhardt, Rodrigo A. Medellin, Martina Nagy, Brian Pope, Megan L. Power, Roger D. Ransome, Emma C. Teeling, Sonja Vernes, Daniel Zamora-Mejías, Joshua Zhang, Paul A. Faure, Lucas J. Greville, Steve Horvath
Nature Communications 2021 vol. 12
CamGFR v2 Edward H Williams, Thomas R Flint, Claire M Connell, Daniel Giglio, Hassal Lee, Taehoon Ha, Eva Gablenz, Nicholas J Bird, James M J Weaver, Harry Potts, Cameron T Whitley, Michael A Bookman, Andy Lynch, Hannah V Meyer, Simon Tavaré, Tobias Janowitz
Clinical Cancer Research 2021 vol. 27
Ecosystem engineers drive differing microbial community composition in intertidal estuarine sediments Irene Sarah Fortune, Andrew John Blight, Patricia Browne, Morgan Hartley, Matthew Holden, David Maxwell Paterson
PLoS ONE 2021 vol. 16
Rapid parallel adaptation despite gene flow in silent crickets Xiao Zhang, Jack Gregory Rayner, Mark Blaxter, Nathan William Bailey
Nature Communications 2021 vol. 12
The CRISPR ancillary effector Can2 is a dual-specificity nuclease potentiating type III CRISPR defence Sabine Gruschow, Shirley Graham, Tracey Gloster, Malcolm White
Nucleic Acids Research 2021 vol. 49 pp. 2777–2789
Comparative genomics of two inbred lines of the potato cyst nematode Globodera rostochiensis reveals disparate effector family-specific diversification patterns Joris J.M. van Steenbrugge, Sven van den Elsen, Martijn Holterman, Mark G. Sterken, Peter Jacob Thorpe, Aska Goverse, Geert Smant, Johannes Helder
BMC Genomics 2021 vol. 22
The Nereid on the rise B. Duygu Özpolat, Nadine Randel, Elizabeth Williams, Luis Alberto Bezares-Calderon, Gabriele Andreatta, Guillaume Balavoine, Paola Bertucci, David Ellard Keith Ferrier, Maria Cristina Gambi, Eve Gazave, Mette Handberg-Thorsager, Jörg Hardege, Cameron Hird, Yu-Wen Hsieh, Jerome Hui, Kevin Nzumbi Mutemi, Stephan Schneider, Oleg Simakov, Hernando Vergara, Michel Vervoort, Gáspár Jékely, Kristin Tessmar-Raible, Florian Raible, Detlev Arendt
EvoDevo 2021 vol. 12
Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland Ana da Silva Filipe, James G. Shepherd, Thomas Williams, Joseph Hughes, Elihu Aranday-Cortes, Patawee Asamaphan, Shirin Ashraf, Carlos Balcazar, Kirstyn Brunker, Alasdair Campbell, Stephen Carmichael, Chris Davis, Rebecca Dewar, Michael D. Gallagher, Rory Gunson, Verity Hill, Antonia Ho, Ben Jackson, Edward James, Natasha Jesudason, Natasha Johnson, E. Carol McWilliam Leitch, Kathy Li, Alasdair MacLean, Daniel Mair, David A. McAllister, John T. McCrone, Sarah E. McDonald, Martin Patrick McHugh, A. Keith Morris, Jenna Nichols, Marc Niebel, Kyriaki Nomikou, Richard J. Orton, Áine O’Toole, Massimo Palmarini, Yasmin A. Parr, Andrew Rambaut, Stefan Rooke, Sharif Shaaban, Rajiv Shah, Joshua B. Singer, Katherine Smollett, Igor Starinskij, Lily Tong, Vattipally B. Sreenu, Elizabeth Wastnedge, Matthew Holden, David L. Robertson
Nature Microbiology 2021 vol. 6 pp. 112-122
Genomic surveillance of Pseudomonas aeruginosa in the Philippines, 2013-2014 Jeremiah Chilam, Silvia Argimón, Marilyn T Limas, Melissa L Masim, June M Gayeta, Marietta L Lagrada, Agnettah M Olorosa, Victoria Cohen, Lara T Hernandez, Benjamin Jeffrey, Khalil Abudahab, Charmian M Hufano, Sonia B Sia, Matthew Holden, John Stelling, David M Aanensen, Celia C Carlos
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 4-18
Genomic surveillance of methicillin-resistant Staphylococcus aureus in the Philippines, 
2013-2014 Melissa L Masim, Silvia Argimón, Holly O Espiritu, Mariane A Magbanua, Marietta L Lagrada, Agnettah M Olorosa, Victoria Cohen, June M Gayeta, Benjamin Jeffrey, Khalil Abudahab, Charmian M Hufano, Sonia B Sia, Matthew Holden, John Stelling, David M Aanensen, Celia C Carlos
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 6-16
Towards complete and error-free genome assemblies of all vertebrate species Arang Rhie, Shane A McCarthy, Olivier Fedrigo, Joana Damas, Giulio Formenti, Sergey Koren, Marcela Uliano-Silva, William Chow, Arkarachai Fungtammasan, Juwan Kim, Chul Lee, Byung June Ko, Mark Chaisson, Gregory L Gedman, Lindsey J Cantin, Francoise Thibaud-Nissen, Leanne Haggerty, Iliana Bista, Michelle Smith, Bettina Haase, Jacquelyn Mountcastle, Sylke Winkler, Sadye Paez, Jason Howard, Sonja Vernes, Tanya M Lama, Frank Grutzner, Wesley C Warren, Christopher N Balakrishnan, Dave Burt, Julia M George, Matthew T Biegler, David Iorns, Andrew Digby, Daryl Eason, Bruce Robertson, Taylor Edwards, Mark Wilkinson, George Turner, Axel Meyer, Andreas F Kautt, Paolo Franchini, H William Detrich, Hannes Svardal, Maximilian Wagner, Gavin J P Naylor, Martin Pippel, Milan Malinsky, Mark Mooney, Robert S Harris
Nature 2021 vol. 592 pp. 737-746

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Bioinformatics Publications

68 (of 68 /dk/atira/pure/researchoutput/status/published available) for St Andrews Bioinformatics Unit. (source: University of St Andrews PURE)
Please click title of any item for full details

Clinical perspectives in integrating whole genome sequencing into the investigation of healthcare and public health outbreaks – hype or help? Stephen Henry Gillespie, Kerry A. Pettigrew, Matthew Holden
Journal of Hospital Infection 2021 vol. 109 pp. 1-9
Rapid parallel adaptation despite gene flow in silent crickets Xiao Zhang, Jack Gregory Rayner, Mark Blaxter, Nathan William Bailey
Nature Communications 2021 vol. 12
Random graphs with arbitrary clustering and their applications V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
A genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows Nicolas Dussex, Verena E. Kutschera, Gavin R. Hunt, Russell D. Gray, Kim Rutherford, Hideaki Abe, Robert C. Fleischer, Michael Gordon Ritchie, Christian Rutz, Jochen B.Wolf, Neil J. Gemmell
Molecular Ecology 2021 vol. 30 pp. 973-986
Sex-specific responses to cold in a very cold-tolerant, northern Drosophila species Tapio Envall, Michael Gordon Ritchie, Maaria Kankare
Heredity 2021 vol. 126 pp. 695–705
Percolation in random graphs with higher-order clustering V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland Ana da Silva Filipe, James G. Shepherd, Thomas Williams, Joseph Hughes, Elihu Aranday-Cortes, Patawee Asamaphan, Shirin Ashraf, Carlos Balcazar, Kirstyn Brunker, Alasdair Campbell, Stephen Carmichael, Chris Davis, Rebecca Dewar, Michael D. Gallagher, Rory Gunson, Verity Hill, Antonia Ho, Ben Jackson, Edward James, Natasha Jesudason, Natasha Johnson, E. Carol McWilliam Leitch, Kathy Li, Alasdair MacLean, Daniel Mair, David A. McAllister, John T. McCrone, Sarah E. McDonald, Martin Patrick McHugh, A. Keith Morris, Jenna Nichols, Marc Niebel, Kyriaki Nomikou, Richard J. Orton, Áine O’Toole, Massimo Palmarini, Yasmin A. Parr, Andrew Rambaut, Stefan Rooke, Sharif Shaaban, Rajiv Shah, Joshua B. Singer, Katherine Smollett, Igor Starinskij, Lily Tong, Vattipally B. Sreenu, Elizabeth Wastnedge, Matthew Holden, David L. Robertson
Nature Microbiology 2021 vol. 6 pp. 112-122
CamGFR v2 Edward H Williams, Thomas R Flint, Claire M Connell, Daniel Giglio, Hassal Lee, Taehoon Ha, Eva Gablenz, Nicholas J Bird, James M J Weaver, Harry Potts, Cameron T Whitley, Michael A Bookman, Andy Lynch, Hannah V Meyer, Simon Tavaré, Tobias Janowitz
Clinical Cancer Research 2021 vol. 27
The CRISPR ancillary effector Can2 is a dual-specificity nuclease potentiating type III CRISPR defence Sabine Gruschow, Shirley Graham, Tracey Gloster, Malcolm White
Nucleic Acids Research 2021 vol. 49 pp. 2777–2789
Protocol for an interdisciplinary cross-sectional study investigating the social, biological and community-level drivers of antimicrobial resistance (AMR) Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Katherine Lisa Keenan, Mike Kesby, Joseph R. Mwanga, Derek James Sloan, Blandina T. Mmbaga, V Anne Smith, Stephen Henry Gillespie, Andy Lynch, Alison Fiona Sandeman, John Stelling, Alison Elliott, David M. Aanensen, Gibson E. Kibiki, Wilber Sabiiti, Matthew Holden,
BMJ Open 2021 vol. 11
Plasmodium knowlesi – clinical isolate genome sequencing to inform translational same-species model system for severe malaria Cyrus John Daneshvar, Janet Cox-Singh
Frontiers in Cellular and Infection Microbiology 2021 vol. 11
Experimental evolution supports signatures of sexual selection in genomic divergence Paris Veltsos, Rhonda Snook, Michael Gordon Ritchie
Evolution Letters 2021 vol. 5 pp. 214-229
Bayesian Network Analysis reveals resilience of the jellyfish Aurelia aurita to an Irish Sea regime shift Emily G. Mitchell, Margaret Isabel Wallace, V Anne Smith, Amanda A. Wiesenthal, Andrew Stuart Brierley
Scientific Reports 2021 vol. 11
Ecosystem engineers drive differing microbial community composition in intertidal estuarine sediments Irene Sarah Fortune, Andrew John Blight, Patricia Browne, Morgan Hartley, Matthew Holden, David Maxwell Paterson
PLoS ONE 2021 vol. 16
Toward genetic modification of plant-parasitic nematodes Olaf Kranse, Helen Beasley, Sally Adams, Andre Pires-daSilva, Christopher Bell, Catherine J Lilley, Peter E Urwin, David Bird, Eric Miska, Geert Smant, Godelieve Gheysen, John Jones, Mark Viney, Pierre Abad, Thomas R Maier, Thomas J Baum, Shahid Siddique, Valerie Williamson, Alper Akay, Sebastian Eves-van den Akker
G3: Genes, Genomes, Genetics 2021 vol. 11
Potato cyst nematodes Globodera rostochiensis and G. pallida James Alexander Price, Danny Coyne, Vivian C. Blok, John Jones
Molecular Plant Pathology 2021 vol. 22 pp. 495-507
Handedness in Twins: Meta-Analyses Silvia Paracchini
PsyArXiv 2021
DNA methylation predicts age and provides insight into exceptional longevity of bats Gerald S. Wilkinson, Danielle M. Adams, Amin Haghani, Ake T. Lu, Joseph Zoller, Charles E. Breeze, Bryan D. Arnold, Hope C. Ball, Gerald G. Carter, Lisa Noelle Cooper, Dina K. N. Dechmann, Paolo Devanna, Nicolas J. Fasel, Alexander V. Galazyuk, Linus Günther, Edward Hurme, Gareth Jones, Mirjam Knörnschild, Ella Z. Lattenkamp, Caesar Z. Li, Frieder Mayer, Josephine A. Reinhardt, Rodrigo A. Medellin, Martina Nagy, Brian Pope, Megan L. Power, Roger D. Ransome, Emma C. Teeling, Sonja Vernes, Daniel Zamora-Mejías, Joshua Zhang, Paul A. Faure, Lucas J. Greville, Steve Horvath
Nature Communications 2021 vol. 12
Variable dosage compensation is associated with female consequences of an X-linked, male-beneficial mutation Jack Gregory Rayner, Nathan William Bailey
Proceedings of the Royal Society of London Series B: Biological Sciences 2021 vol. 288
Animal personality adds complexity to the processes of divergence between sympatric morphs of Arctic charr Quentin J.-B. Horta-Lacueva, David Benhaïm, Michael Blair Morrissey, Sigurður S. Snorrason, Kalina H. Kapralova
Animal Behaviour 2021 vol. 175 pp. 57-73
Hand preference and mathematical learning difficulties: New data from Greece, the United Kingdom, and Germany and two meta-analyses of the literature Marietta Papadatou-Pastou, Despoina-Athanasia Panagiotidou, Ursula Fischer, Silvia Paracchini, Giannis Karagiannakis
Laterality 2021 vol. Latest Articles
A rare missense variant in the ATP2C2 gene is associated with language impairment and related measures Angela Martinelli, Mabel Rice, Joel B. Talcott, Shelley Smith, Muhammad Hashim Raza, Margaret J. Snowling, Charles Hulme, John Stein, Marianna E. Hayiou-Thomas, Ziarih Hawi, Lindsey Kent, Samantha J. Pitt, Dianne F. Newbury, Silvia Paracchini
Human Molecular Genetics 2021 vol. 30 pp. 1160–1171
Impacts of jellyfish on marine cage aquaculture Morag Clinton, David Ellard Keith Ferrier, Samuel A M Martin, Andrew Stuart Brierley
ICES Journal of Marine Science 2021 vol. 78 pp. 1557–1573
The distinction between repeatability and correlation in studies of animal behaviour Miguel Borges Da Costa Guint Barbosa, Michael Blair Morrissey
Animal Behaviour 2021 vol. 175 pp. 201-217
Real-time imaging of cellular forces using optical interference Nils Michael Kronenberg, Andrew Morton, Jan Murawski, Simon John Powis, Malte Christian Gather
Nature Communications 2021 vol. 12
Hearing sensitivity and amplitude coding in bats are differentially shaped by echolocation calls and social calls Ella Z Lattenkamp, Martina Nagy, Markus Drexl, Sonja Vernes, Lutz Wiegrebe, Mirjam Knörnschild
Proceedings of the Royal Society B: Biological Sciences 2021 vol. 288
Towards complete and error-free genome assemblies of all vertebrate species Arang Rhie, Shane A McCarthy, Olivier Fedrigo, Joana Damas, Giulio Formenti, Sergey Koren, Marcela Uliano-Silva, William Chow, Arkarachai Fungtammasan, Juwan Kim, Chul Lee, Byung June Ko, Mark Chaisson, Gregory L Gedman, Lindsey J Cantin, Francoise Thibaud-Nissen, Leanne Haggerty, Iliana Bista, Michelle Smith, Bettina Haase, Jacquelyn Mountcastle, Sylke Winkler, Sadye Paez, Jason Howard, Sonja Vernes, Tanya M Lama, Frank Grutzner, Wesley C Warren, Christopher N Balakrishnan, Dave Burt, Julia M George, Matthew T Biegler, David Iorns, Andrew Digby, Daryl Eason, Bruce Robertson, Taylor Edwards, Mark Wilkinson, George Turner, Axel Meyer, Andreas F Kautt, Paolo Franchini, H William Detrich, Hannes Svardal, Maximilian Wagner, Gavin J P Naylor, Martin Pippel, Milan Malinsky, Mark Mooney, Robert S Harris
Nature 2021 vol. 592 pp. 737-746
Cooperative coinfection dynamics on clustered networks P. Mann, V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
The multi-dimensional nature of vocal learning Sonja Vernes, Buddhamas (Pralle) Kriengwatana, Veronika Beeck, Julia Fischer, Peter Lloyd Tyack, Carel ten Cate, Vincent Janik
Philosophical Transactions of the Royal Society. B, Biological Sciences 2021 vol. 376
Two-pathogen model with competition on clustered networks V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
Genome expression dynamics reveal the parasitism regulatory landscape of the root-knot nematode Meloidogyne incognita and a promoter motif associated with effector genes Martine Da Rocha, Caroline Bournaud, Julie Dazenière, Peter Jacob Thorpe, Marc Bailly-Bechet, Clément Pellegrin, Arthur Péré, Priscila Grynberg, Laetitia Perfus-Barbeoch, Sebastian Eves-van den Akker, Etienne G. J. Danchin
Genes 2021 vol. 12
Cold adaptation drives population genomic divergence in the ecological specialist, Drosophila montana Venera Tyukmaeva, Anneli Hoikkala, Michael Gordon Ritchie, Maaria Kankare
Molecular Ecology 2021 vol. 30 pp. 3783-3796
Cyclic oligoadenylate signaling and regulation by ring nucleases during type III CRISPR defense Januka Sahan Athukoralage, Malcolm White
RNA 2021 vol. 27 pp. 855-867
Vocal learning in animals and humans Sonja Vernes, Vincent Janik, William Tecumseh Sherman Fitch, Peter James Bramwell Slater
Philosophical Transactions of the Royal Society. B, Biological Sciences 2021 vol. 376
Genomic surveillance of Neisseria gonorrhoeae in the Philippines, 2013-2014 Manuel C Jamoralin, Silvia Argimón, Marietta L Lagrada, Alfred S Villamin, Melissa L Masim, June M Gayeta, Karis D Boehme, Agnettah M Olorosa, Sonia B Sia, Charmian M Hufano, Victoria Cohen, Lara T Hernandez, Benjamin Jeffrey, Khalil Abudahab, John Stelling, Matthew Holden, David M Aanensenb, Celia C Carlosa
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 17-25
Genomic surveillance of methicillin-resistant Staphylococcus aureus in the Philippines, 
2013-2014 Melissa L Masim, Silvia Argimón, Holly O Espiritu, Mariane A Magbanua, Marietta L Lagrada, Agnettah M Olorosa, Victoria Cohen, June M Gayeta, Benjamin Jeffrey, Khalil Abudahab, Charmian M Hufano, Sonia B Sia, Matthew Holden, John Stelling, David M Aanensen, Celia C Carlos
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 6-16
Exact formula for bond percolation on cliques V Anne Smith, John B. O. Mitchell, Christopher Anthony Jefferson, Simon Andrew Dobson
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics 2021 vol. 104
Symbiotic and antagonistic disease dynamics on clustered networks using bond percolation V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 104
Re-identification of individuals from images using spot constellations Ignacy T. De¸bicki, Lizy Mittell, Bjarni K. Kristjánsson, Camille A. Leblanc, Michael Blair Morrissey, Kasim Terzic
Royal Society Open Science 2021 vol. 8
Editorial: Cytomegalovirus pathogenesis and host interactions Emma L. Poole, Michael Martin Nevels
Frontiers in Cellular and Infection Microbiology 2021 vol. 11
A neglected conceptual problem regarding phenotypic plasticity’s role in adaptive evolution Nathan William Bailey, Camille Desjonqueres, Jack Gregory Rayner, Xiao Zhang
Evolution Letters 2021 vol. 5 pp. 444-457
Comparative genomics of two inbred lines of the potato cyst nematode Globodera rostochiensis reveals disparate effector family-specific diversification patterns Joris J.M. van Steenbrugge, Sven van den Elsen, Martijn Holterman, Mark G. Sterken, Peter Jacob Thorpe, Aska Goverse, Geert Smant, Johannes Helder
BMC Genomics 2021 vol. 22
Dispensing antibiotics without prescription at the community pharmacies and accredited drug dispensing outlets in Tanzania Pendo M. Ndaki, Martha F. Mushi, Joseph R. Mwanga, Eveline T. Konje, Nyanda E. Ntinginya, Blandina T. Mmbaga, Katherine Lisa Keenan, Wilber Sabiiti, Mike Kesby, Manuel Fernando Benitez Paez, Alison Fiona Sandeman, Matthew Holden, Stephen E. Mshana,
Antibiotics 2021 vol. 10
Selection on ancestral genetic variation fuels repeated ecotype formation in bottlenose dolphins Marie Louis, Marco Galimberti, Frederick Archer, Simon Berrow, Andrew Brownlow, Ramon Fallon, Milaja Nykänen, Joanne O'Brien, Kelly Robertson, Patricia E. Rosel, Benoit Simon-Bouhet, Daniel Wegmann, Michael Fontaine, Andrew Foote, Oscar Eduardo Gaggiotti
Science Advances 2021 vol. 7
DrosoPhyla Cédric Finet, Victoria A Kassner, Antonio B Carvalho, Henry Chung, Jonathan P Day, Stephanie Day, Emily K Delaney, Francine C De Ré, Héloïse D Dufour, Eduardo Dupim, Hiroyuki F Izumitani, Thaísa B Gautério, Jessa Justen, Toru Katoh, Artyom Kopp, Shigeyuki Koshikawa, Ben Longdon, Elgion L Loreto, Maria D S Nunes, Komal K B Raja, Mark Rebeiz, Michael Gordon Ritchie, Gayane Saakyan, Tanya Sneddon, Machiko Teramoto, Venera Tyukmaeva, Thyago Vanderlinde, Emily E Wey, Thomas Werner, Thomas M Williams, Lizandra J Robe, Masanori J Toda, Ferdinand Marlétaz
Genome Biology and Evolution 2021 vol. 13
The vocal development of the pale spear-nosed bat is dependent on auditory feedback Ella Z. Lattenkamp, Meike Linnenschmidt, Eva Mardus, Sonja Vernes, Lutz Wiegrebe, Michael Schutte
Philosophical Transactions of the Royal Society B: Biological Sciences 2021 vol. 376
Neuroanatomy of the grey seal brain Nienke Hoeksema, Laura Verga, Janine Mengede, Corné van Roessel, Stella Villanueva, Anna Salazar-Casals, Ana Rubio-Garcia, Branislava Ćurčić-Blake, Sonja Vernes, Andrea Ravignani
Philosophical Transactions of the Royal Society B: Biological Sciences 2021 vol. 376
Multivariate analysis of morphology, behaviour, growth and developmental timing in hybrids brings new insights into the divergence of sympatric Arctic charr morphs Quentin J.-B. Horta-Lacueva, Sigurður S. Snorrason, Michael Blair Morrissey, Camille A.-L. Leblanc, Kalina H. Kapralova
BMC Ecology and Evolution 2021 vol. 21
The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe Megan A. Wallace, Kelsey A. Coffman, Clément Gilbert, Sanjana Ravindran, Gregory F. Albery, Jessica Abbott, Eliza Argyridou, Paola Bellosta, Andrea J. Betancourt, Hervé Colinet, Katarina Eric, Amanda Glaser-Schmitt, Sonja Grath, Mihailo Jelic, Maaria Kankare, Iryna Kozeretska, Volker Loeschcke, Catherine Montchamp-Moreau, Lino Ometto, Banu Sebnem Onder, Dorcas J. Orengo, John Parsch, Marta Pascual, Aleksandra Patenkovic, Eva Puerma, Michael Gordon Ritchie, Omar Rota-Stabelli, Mads Fristrup Schou, Svitlana Serga, Marina Stamenkovic-Radak, Marija Tanaskovic, Marija Savic Veselinovic, Jorge Vieira, Cristina P. Vieira, Martin Kapun, Thomas Flatt, Josefa González, Fabian Staubach, Darren J. Obbard
Virus Evolution 2021 vol. 7
Genomic surveillance of Pseudomonas aeruginosa in the Philippines, 2013-2014 Jeremiah Chilam, Silvia Argimón, Marilyn T Limas, Melissa L Masim, June M Gayeta, Marietta L Lagrada, Agnettah M Olorosa, Victoria Cohen, Lara T Hernandez, Benjamin Jeffrey, Khalil Abudahab, Charmian M Hufano, Sonia B Sia, Matthew Holden, John Stelling, David M Aanensen, Celia C Carlos
Western Pacific Surveillance and Response Journal 2021 vol. 12 pp. 4-18
Recent advances in handedness genetics Silvia Paracchini
Symmetry 2021 vol. 13
Draft genome assemblies for tree pathogens Phytophthora pseudosyringae and Phytophthora boehmeriae Peter Jacob Thorpe, Ramesh R Vetukuri, Pete E Hedley, Jenny Morris, Maximilian A Whisson, Lydia R J Welsh, Stephen C Whisson
G3: Genes, Genomes, Genetics 2021 vol. 11
The Nereid on the rise B. Duygu Özpolat, Nadine Randel, Elizabeth Williams, Luis Alberto Bezares-Calderon, Gabriele Andreatta, Guillaume Balavoine, Paola Bertucci, David Ellard Keith Ferrier, Maria Cristina Gambi, Eve Gazave, Mette Handberg-Thorsager, Jörg Hardege, Cameron Hird, Yu-Wen Hsieh, Jerome Hui, Kevin Nzumbi Mutemi, Stephan Schneider, Oleg Simakov, Hernando Vergara, Michel Vervoort, Gáspár Jékely, Kristin Tessmar-Raible, Florian Raible, Detlev Arendt
EvoDevo 2021 vol. 12
Hyperkinetic stereotyped movements in a boy with biallelic CNTNAP2 variants Marcello Scala, Midas Anijs, Roberta Battini, Francesca Madia, Valeria Capra, Paolo Scudieri, Alberto Verrotti, Federico Zara, Carlo Minetti, Sonja Vernes, Pasquale Striano
Italian Journal of Pediatrics 2021 vol. 47
Speciation in the deep Emma Louise Carroll, Michael R. McGowen, Morgan L. McCarthy, Felix G. Marx, Natacha Aguilar, Merel L. Dalebout, Sascha Dreyer, Oscar Eduardo Gaggiotti, Sabine S. Hansen, Anton van Helden, Aubrie Onoufriou, Robin W. Baird, C. Scott Baker, Simon Berrow, Danielle Cholewiak, Rochelle Constantine, Nicholas J. Davison, Catarina Eira, R. Ewan Fordyce, John Gatesy, G. J. Greg Hofmeyr, Vidal Martín, James G. Mead, Antonio A. Mignucci-Giannoni, Phillip A. Morin, Cristel Reyes, Emer Rogan, Massimiliano Rosso, Mark S. Springer, Debbie Steel, Morten Tange Olsen
Proceedings of the Royal Society B: Biological Sciences 2021 vol. 288
Sampling the fish gill microbiome Morag Clinton, Samuel A. M. Martin, Andrew Stuart Brierley, David Ellard Keith Ferrier
BMC Microbiology 2021 vol. 21
The role of multidimensional poverty in antibiotic misuse Dominique LaShari Green, Katherine Lisa Keenan, Sarah Insia Huque, Mike Kesby, Martha F. Mushi, Catherine Kansiime, Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Joseph R. Mwanga, Andy Lynch, Hannah Worthington, Emmanuel Olawale Olamijuwon, Mary Abed Al Ahad, Annette Aduda, Blandina T. Mmbaga, Joel Bazira, Alison Fiona Sandeman, John Stelling, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiti, Derek James Sloan, Matthew Holden, Hatua Consortium
SSRN Electronic Journal 2021
PHYTO-THREATS Sarah Green, David E. L. Cooke, Mike Dunn, Louise Barwell, Bethan Purse, Daniel S. Chapman, Gregory Valatin, Alexandra Schlenzig, Jane Barbrook, Tim Pettitt, Colin Price, Ana Pérez-Sierra, Debra Frederickson-Matika, Leighton Pritchard, Peter Jacob Thorpe, Peter J. A. Cock, Eva Randall, Beatrix Keillor, Mariella Marzano
Forests 2021 vol. 12
Rationally designed mariner vectors for functional genomic analysis of Actinobacillus pleuropneumoniae and other Pasteurellaceae species by transposon-directed insertion-site sequencing (TraDIS) Janine T. Bossé, Yanwen Li, Leon G. Leanse, Liqing Zhou, Roy R. Chaudhuri, Sarah E. Peters, Jinhong Wang, Gareth A. Maglennon, Matthew Holden, Duncan J. Maskell, Alexander W. Tucker, Brendan W. Wren, Andrew N. Rycroft, Paul R. Langford, Alexander W. (. Dan) Tucker, Lucy A. Weinert, Jinhong (. Tracy) Wang, Shi-Lu Luan, Jessica Beddow, Jon Cuccui, Vanessa S. Terra, on behalf of the BRaDP1T consortium
Animal Diseases 2021 vol. 1

Bioinformatics Publications

Infection and Global Health Division: activities

100 recent activities (from 190 available) for Infection and Global Health Division


26/11/2021 
Invited talk
Bernadette O'Hare: The impact of climate change on child health at home and abroad: COP26 and beyond (26/11/2021)

Last year, we joined many other organisations in declaring a climate emergency, highlighting in particular the detrimental impacts of air pollution on younger people. Since then, we have formed a dedicated Climate Change Working Group and are pleased to be hosting an online event focusing on this vital area of work. An exciting programme of speakers and sessions is now being developed and we hope you can join us virtually to be informed and inspired.Description
Keywords:
31/10/2021 
Consultancy and expert advice
Marisol Lopez: An exploration of the financial mechanisms that would drive the realisation of a clean and healthy environment for all children (31/10/2021)

Submission to the Independent Expert on foreign debt, other international financial obligations, and human rightsDescription
6/7/2021 
Public engagement, outreach and knowledge exchange - Participation in web based media
Bernadette O'Hare: Tax Justice & Human Rights: The 4 Rs and the realisation of rights (6/7/2021)

Consultation and data provision for reportDescription
1/3/2021 
Membership of public/government advisory/policy group or panel
Bernadette O'Hare: Chair of the international workstream of the RCPCH working group on climate change (External organisation) (1/3/2021 - 28/2/2024)

Sits on the Working Group on Climate Change and is chair of the International workstream.Description
25/1/2021 
Participation in or organising a conference
Stephen Gillespie: Genomics and Clinical Microbiology (25/1/2021 - 29/1/2021)

A course to provide training for clinicians and clinical scientists in genomic methods applied to infectious diseasesDescription
Keywords:
9/12/2020 
Participation in or organising a conference
Matthew Holden: Royal College of Physicians Edinburgh, Infectious Diseases Symposium (9/12/2020)

Royal College of Physicians Edinburgh, Online Symposium: Infectious DiseasesDescription
4/5/2020 
Other
Stephen Gillespie: COVID 19 Opinion (4/5/2020)

Participating in a group preparing a paper to the Scottish Government on COVID 19Description
21/4/2020 
Other
Stephen Gillespie: COVID-19 Research Funding Call Panel for Chief Scientist Office (21/4/2020)

Participation in a funding panel to support research into COVID 19Description
1/3/2020 
Other
Stephen Gillespie: NIHR Urgent Public Health Prioritisation Panel (1/3/2020 - 15/4/2020)

Membership of a DH/NIHR panel assessing potential research projects for prioritisation during the COVID 19 pandemicDescription
21/1/2020 
Participation in or organising a conference
Stephen Gillespie: Genomics and Clinical Microbiology (21/1/2020 - 25/1/2020)

Training course for clinicians and clinical scientists in genomics as applied in clinical practiceDescription
Keywords:
8/1/2020 
Participation in or organising a workshop, seminar, course
Stephen Gillespie: Acid Fast Club Annual Meeting (8/1/2020)

Annual conference of the Acid Fast ClubDescription
1/1/2020 
Membership of public/government advisory/policy group or panel
Bernadette O'Hare: Scottish Government Global Health Core Group (External organisation) (1/1/2020 - 1/1/2022)

Member of the Scottish Government Global Health Core GroupDescription
1/1/2020 
Other
Stephen Gillespie: Wellcome Trust Population and Public Health Expert Review Group (1/1/2020 - 7/5/2020)

Part of the Grant Panel for the Wellcome Trust Population and Public Health Description
1/12/2019 
Membership of public/government advisory/policy group or panel
Bernadette O'Hare: NHS Wales Global Citizenship Course Content Review (Event) (1/12/2019 - 31/12/2019)

NHS Wales Global Citizenship Course Content Review Description
13/11/2019 
6/11/2019 
Invited talk
Stephen Gillespie: Modernising Medical Microbiology (6/11/2019)

Invited Talk to Clinical Microbiologists at the Glasgow Royal InfirmaryDescription
6/10/2019 
Participation in or organising a workshop, seminar, course
Matthew Holden: Train the Trainer: Capacity building for genomic surveillance of AMR in low- and middle-income countries (6/10/2019 - 11/10/2019)

Wellcome Genome Campus Advance Courses - Capacity building for genomic surveillance of AMR in low- and middle-income countriesDescription
25/9/2019 
Membership of peer review panel or committee
Stephen Gillespie: MEDICAL RESEARCH COUNCIL (External organisation) (25/9/2019)

Attending the African Leadership BoardDescription
1/8/2019 
Membership of public/government advisory/policy group or panel
Bernadette O'Hare: GLOBAL HEALTH CORE GROUP MEETING (Event) (1/8/2019)

4/7/2019 
Participation in or organising a workshop, seminar, course
Stephen Gillespie: Acid Fast Annual Summer Meeting (4/7/2019 - 5/7/2019)

Hosting the annual summer meetingDescription
24/6/2019 
Participation in or organising a conference
Andrew Blaikie: VINCYP Training Course (24/6/2019)

Visual Impairment Network for Children & Young PeopleDescription
6/2019 
Participation in or organising a public lecture/debate/seminar
Andrew Blaikie: The Royal College of Ophthalmologists (6/2019)

Evidence base for the Arclight direct ophthalmoscopeDescription
31/3/2019 
Membership of public/government advisory/policy group or panel
Bernadette O'Hare: Scottish Government Global Health Coordination Unit (External organisation) (31/3/2019 - 28/2/2022)

Lead for academia on the Global Health Champions Network Description
3/3/2019 
Participation in or organising a workshop, seminar, course
Matthew Holden: Wellcome Trust Advanced Course: Genomics and Epidemiological Surveillance of Bacterial Pathogens, Peru (3/3/2019 - 8/3/2019)

Wellcome Trust Advanced Course: Genomics and Epidemiological Surveillance of Bacterial Pathogens, PeruDescription
1/3/2019 
Presentation
Andrew Blaikie: UKNOSIG/Dutch Neuro-Ophthalmology meeting (1/3/2019 - 2/3/2019)

UKNOSIG, jointly with the Dutch Neuro-Ophthalmology group NeNOS, will host a meeting on Friday March 1st & Saturday 2nd 2019 at the EYE Filmmuseum, AmsterdamDescription
8/2/2019 
Visiting an external academic institution
Matthew Holden: National Centre for Infectious Diseases (8/2/2019 - 15/2/2019)

National Centre for Infectious Diseases, Short Term FellowshipDescription
2/2/2019 
Participation in or organising a conference
Andrew Blaikie: An Introduction to Childhood Visual Impairment (2/2/2019)

An Introduction to Childhood Visual ImpairmentDescription
13/12/2018 
Invited talk
Bernadette O'Hare: Active Global Citizenship in the NHS (13/12/2018)

Our everyday decisions being made with an awareness of the potential impact on others.Description
20/9/2018 
Invited talk
Bernadette O'Hare: Scottish Global Health Coordination Unit - an update (20/9/2018)

An update on the unit at a Global Health Showcase held for the following African heads of mission. The following countries were represented: Cameroon, Ethiopia, Ghana, Kenya, Uganda, Angola, Tanzania, Cote d’Ivoire, Zambia, Malawi, Swaziland, Gambia, Senegal and Guinea.Description
4/9/2018 
Presentation
Adam Wyness: Impact of infaunal ecosystem engineers on microbial communities (4/9/2018)

presentation at ECSA 57 conference, Perth, WA.Description
13/8/2018 
Visiting an external academic institution
Bernadette O'Hare: Scottish Global Health Coordination Unit (13/8/2018 - 13/2/2019)

Secondment to the Scottish Global Health Coordination UnitDescription
7/8/2018 
5/7/2018 
Participation in or organising a public festival/exhibition/event
Bernadette O'Hare: The Scottish NHS at 70 - National Civic event (5/7/2018)

The Scottish NHS at 70 - National Civic eventDescription
15/6/2018 
25/4/2018 
Participation in or organising a workshop, seminar, course
Matthew Holden: The application of whole genome sequencing in Health Protection Scotland (25/4/2018 - 26/4/2018)

The application of whole genome sequencing in Health Protection ScotlandDescription

Bioinformatics Publications

5 (of 68 /dk/atira/pure/researchoutput/status/published available) for St Andrews Bioinformatics Unit (source: University of St Andrews PURE)
Please click title of any item for full details

Clinical perspectives in integrating whole genome sequencing into the investigation of healthcare and public health outbreaks – hype or help? Stephen Henry Gillespie, Kerry A. Pettigrew, Matthew Holden
Journal of Hospital Infection 2021 vol. 109 pp. 1-9
Rapid parallel adaptation despite gene flow in silent crickets Xiao Zhang, Jack Gregory Rayner, Mark Blaxter, Nathan William Bailey
Nature Communications 2021 vol. 12
Random graphs with arbitrary clustering and their applications V Anne Smith, John B. O. Mitchell, Simon Andrew Dobson
Physical Review. E, Statistical, nonlinear, and soft matter physics 2021 vol. 103
A genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows Nicolas Dussex, Verena E. Kutschera, Gavin R. Hunt, Russell D. Gray, Kim Rutherford, Hideaki Abe, Robert C. Fleischer, Michael Gordon Ritchie, Christian Rutz, Jochen B.Wolf, Neil J. Gemmell
Molecular Ecology 2021 vol. 30 pp. 973-986
Sex-specific responses to cold in a very cold-tolerant, northern Drosophila species Tapio Envall, Michael Gordon Ritchie, Maaria Kankare
Heredity 2021 vol. 126 pp. 695–705

Sea Mammal Research Unit: activities

100 recent activities (from 665 available) for Sea Mammal Research Unit


20/9/2021 
Participation in or organising a workshop, seminar, course
Gordon Hastie: Energy Technology Partnership: Energy Innovation Emporium (20/9/2021)

Organised and hosted an international webinar for scientists, policy makers, industry, and teh general public.Description
1/9/2021 
External examination
Carol Sparling: External Examiner for PhD thesis (1/9/2021)

External Examiner for Nicholas Horne at the University of Queens Belfast. Thesis developed a novel approach to modelling collision risk between marine wildlife and renewable energy infrastructure Description
18/8/2021 
Presentation
Monica Arso Civil: Bottlenose dolphins along the North Sea coast (18/8/2021)

Presentation given as part of the Living Seas LIVE programme organized by Yorkshire Wildlife Trust. A presentation was given on the long-term monitoring programme of the east coast of Scotland bottlenose dolphin population, including the most recent citizen science initiative "Citizen Fins".Description
Keywords: mostly UK participants, public engagement
20/4/2021 
Public lecture/debate/seminar
Gordon Hastie: Marine mammals and offshore renewables: reconciling environmental risks (20/4/2021)

Hosted the Centre for Energy Ethics CafeDescription
15/4/2021 
Public engagement, outreach and knowledge exchange - Newspaper/magazine
Luke Rendell: The hidden world of whale culture (15/4/2021)

Cover story of National Geographic MagazineDescription
22/3/2021 
Public engagement, outreach and knowledge exchange - Participation in radio programme
Luke Rendell: Broadcasting House (22/3/2021)

BBC R4 Sunday morning current affairs programmeDescription
18/3/2021 
Public engagement, outreach and knowledge exchange - Participation in radio programme
Luke Rendell: Inside Science (18/3/2021)

BBC R4 important science programmeDescription
4/3/2021 
Invited talk
Douglas Gillespie: Is it working ? The PAMGuard Signal Injection and Detection Evaluation (SIDE) Module (4/3/2021)

Workshop to discuss use of Passive Acoustic Monitoring for mitigation of effects of Seismic Surveys on marine mammals in UK watersDescription
Keywords: Management, Monitoring, Policy and Law
27/1/2021 
Invited talk
Monica Arso Civil: Bottlenose dolphins off the east coast of Scotland... and beyond (27/1/2021)

Presentation to the Levenmouth Whale Project to talk about the long-term monitoring project of bottlenose dolphins off the east coast of Scotland and the importance of citizen science data.Description
Keywords: mostly Scottish participants, public engagement, widening access
2021 
Public engagement, outreach and knowledge exchange - Participation in web based media
Luke Rendell: Sea Symphonies poem (2021)

A poem published in national print and online magazine Consilience inspired by our research outreach activities, evidence of impact. Description
2021 
Membership of peer review panel or committee
Gordon Hastie: Society for Underwater Technology (External organisation) (2021)

Explosives Subcommittee MemberDescription
14/12/2020 
Presentation
Katherine Whyte: British Ecological Society: Festival of Ecology 2020 (14/12/2020 - 18/12/2020)

Talk: "Detecting changes in movement behaviour in response to disturbance: seals and offshore wind farm construction"

(Event held online due to Covid-19)Description
27/11/2020 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: Scottish Research Showcase (27/11/2020)

The "Scottish Research Showcase" was a one-day outreach event, hosted on Twitter and organised by Explorathon 2020 and Global Science Show.

I produced a short video introducing my ongoing research into seals and offshore wind farm construction noise.

The video was produced to be accessible to all audiences and has been watched more than 1200 times worldwide. Local schools were made aware of the event and encouraged to watch the videos. The video remains available to view online at the following URL: https://twitter.com/katey_whyte/status/1332304601006153728?s=20Description
Keywords: mostly Scottish participants
4/11/2020 
Participation in or organising a workshop, seminar, course
Sophie Smout: NAMMCO-ICES WORKSHOP ON SEAL MODELLING (4/11/2020 - 6/11/2020)

ICES/NAMMCO Workshop: Population Models for Ice-Breeding SealsDescription
Keywords: Environmental Science(all), Mathematics(all)mostly EU participants, equal gender balance of participants
21/10/2020 
1/10/2020 
Invited talk
Catriona Harris: Counting critters: why and how we monitor populations (1/10/2020)

Presentation to secondary school science teachers as part of professional development course at the Scottish Schools Education Research CentreDescription
Keywords: more female participants, school curriculum development activity, secondary school, mostly Scottish participants
1/9/2020 
Peer review of manuscripts
Matt Carter: Endangered Species Research (Journal) (1/9/2020)

Review EditorDescription
6/8/2020 
22/6/2020 
Presentation
Katherine Whyte: (virtual) International Statistical Ecology Conference 2020 (22/6/2020 - 26/6/2020)

Talk: "Detecting changes in movement behaviour in response to disturbance using Mahalanobis distance"

(Conference moved online due to Covid-19)Description
28/5/2020 
Participation in or organising a workshop, seminar, course
Simon Northridge: NAMMCO Bycatch working group meeting (28/5/2020)

NAMMCO Bycatch working group meetingDescription
Keywords:
6/5/2020 
Peer review of manuscripts
Sophie Smout: Oikos (Journal) (6/5/2020)

Research Article reviewDescription
30/4/2020 
Presentation
Douglas Gillespie: Passive acoustic monitoring at the Meygen tidal turbine array, Scotland Lessons Learned (30/4/2020)

Presentation to an International worshop organised by the European Marine Energy Centre (EMEC) "Passive acoustic monitoring in high flow environments"Description
Keywords: Environmental Science(all)
22/4/2020 
Invited talk
Gordon Hastie: Development of a sensor platform for marine mammal tracking (22/4/2020)

Webinar on the International Forum on MRE Environmental Research and Development Webinar SeriesDescription
16/3/2020 
2020 
Membership of public/government advisory/policy group or panel
Debbie Russell: IUCN Pinniped Specialist Group (External organisation) (2020)

Harbour Seal expertDescription
2020 
Peer review of manuscripts
Matt Carter: Movement Ecology (Journal) (2020)

Peer ReviewDescription
2020 
Peer review of manuscripts
Matt Carter: Scientific Reports (Journal) (2020)

Peer ReviewDescription
9/12/2019 
Presentation
Katherine Whyte: World Marine Mammal Conference 2019 (9/12/2019 - 12/12/2019)

Speed talk: "An evaluation of Mahalanobis distance as a method to detect behavioural response in marine mammals from tag data"Description
8/12/2019 
Participation in or organising a workshop, seminar, course
Lucía Martín López: Movement Tag Data workshop (8/12/2019)

12/2019 
Presentation
Lucía Martín López: Does navy sonar signals elicit a startle response in cetaceans? (12/2019)

Poster, Society of Marine Mammals 23rd Biennial conference, Barcelona, SpainDescription
10/11/2019 
Public engagement, outreach and knowledge exchange - Participation in web based media
Lucía Martín López: Science and public engagement in the Southern Ocean project (10/11/2019 - 31/12/2019)

The main objective of the Predator-Prey Interaction in the Southern Ocean research project is to establish a long-term database of distribution and abundance estimates for krill-dependent predators in the key fishing grounds along the western Antarctic Peninsula. It also focussed on public talks to onboard guests so they can learn the basics for quantifying animal abundance and habitat use understanding the importance of biodiversity protection and how this can be achieved by applying methods for observing marine predators and overlapping its density with krill fisheries.Description
25/10/2019 
Participation in or organising a public festival/exhibition/event
Catriona Harris: S1 First Chances Foundation Programme (25/10/2019)

CREEM and SMRU ran a marine mammal photo-ID and mark-recapture activity as part of a First Chances event for S1 and S2 students from local schoolsDescription
Keywords: mostly Scottish participants, secondary school, public engagement, widening access
22/10/2019 
Participation in or organising a workshop, seminar, course
Philip Hammond: Estimation of marine mammal abundance (22/10/2019 - 24/10/2019)

Course leaderDescription
Keywords: widening access, mostly international participants
16/10/2019 
External reviewing
Sonja Heinrich: External Review of Taught Programmes in Biology and Marine Biology, School of Natural and Environmental Science, Newcastle (16/10/2019 - 18/10/2019)

Panel member of External Review of Taught Programmes in Biology and Marine Biology, School of Natural and Environmental Science, NewcastleDescription
28/9/2019 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: Explorathon 2019 (28/9/2019)

Explorathon 2019 at Dundee Science Centre:

We had a stall within Dundee Science Centre and ran family-friendly activities on the topic of "Become a whale scientist!". The activities covered: how big are whales, how do whales feed, what do whales eat, and how do we identify whales? We also brought along specimens from real whales (eg. skulls, baleen, teeth) to show visitors.Description
Keywords: equal gender balance of participants, mostly Scottish participants, public engagement, primary school, secondary school
10/9/2019 
Presentation
Katherine Whyte: SCOS Science Day 2019 (10/9/2019)

Special Committee on Seals (SCOS) Science Day

Talk: "Behavioural responses to pile driving in harbour seals"Description
2/9/2019 
Membership of public/government advisory/policy group or panel
Sophie Smout: ICES Working Group on Harp and Hooded Seals (External organisation) (2/9/2019 - 6/9/2019)

Population dynamics and management advice Description
27/8/2019 
Presentation
Katherine Whyte: 5th Conference on Wind Energy and Wildlife Impacts (27/8/2019 - 29/8/2019)

Talk: "Changes in harbour seal behaviour in response to offshore wind farm construction noise"Description
23/8/2019 
Membership of public/government advisory/policy group or panel
Sonja Heinrich: Participant, Chilean Marine Mammal Expert Advisory group meeting (Event) (23/8/2019)

Meeing of the Chilean Marine Mammal Expert advisory groupDescription
9/7/2019 
Public lecture/debate/seminar
Katherine Whyte: Public Lecture at Effects of Noise on Aquatic Life (9/7/2019)

Invited speaker at the public lecture evening of the Effects of Noise of Aquatic Life 2019 conference: "Seals, science, and the sound of offshore wind farms"Description
Keywords: public engagement, mostly EU participants, equal gender balance of participants
8/7/2019 
Public lecture/debate/seminar
Monica Arso Civil: Update on the harbour seal decline project (8/7/2019)

In the last decade harbour seal numbers on the east coast of Scotland and in the Northern Islands have declined by up to 85%. In contrast, numbers in West Scotland and the Western Isles have remained stable or increased. The Harbour Seal Decline Project, led by a research team at the Sea Mammal Research Unit, was commissioned by the Scottish Government to address possible reasons behind the decline. The main tasks are to estimate the vital rates (pregnancy, birth and death) of seals in regions with contrasting population trajectories, and to investigate the drivers for any changes in these population vital rates. I will be presenting a summary of initial findings and an update on how the field season is going in Orkney this summer. Description
Keywords: equal gender balance of participants, mostly UK participants, public engagement, widening access
7/7/2019 
Presentation
Katherine Whyte: 5th International Conference on the Effects of Noise on Aquatic Life (7/7/2019 - 12/7/2019)

Poster and speed talk: "Behavioural responses of seals to pile driving during offshore wind farm construction"Description
7/6/2019 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: St Andrews Bioblitz (7/6/2019 - 8/6/2019)

"Expert" for rocky shore surveys (rockpooling) with school groups and the general public at the St Andrews Bioblitz 2019.Description
Keywords: public engagement, mostly Scottish participants, equal gender balance of participants
3/6/2019 
Visiting an external academic institution
Joanna Kershaw: University of Liverpool, Liverpool (3/6/2019 - 4/6/2019)

ARISE Predator MeetingDescription
1/6/2019 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: BioMusic (1/6/2019 - 13/11/2019)

In 2019, I collaborated with a composer at the Royal Conservatoire of Scotland, Aileen Sweeney, who composed a piece of music inspired by my research. The composition, entitled "Spindly White Flowers", was performed in November in St Andrews.Description
27/5/2019 
Invited talk
Gordon Hastie: Seals and tidal energy (27/5/2019)

Invited talk at Aarhus University, DenmarkDescription
27/5/2019 
Visiting an external academic institution
Joanna Kershaw: University of Liverpool, Liverpool (27/5/2019 - 1/6/2019)

Working with collaborators at the University of Liverpool as part of the ARISE, Changing Arctic Oceans project funded by NERC. Description
18/5/2019 
Participation in or organising a public festival/exhibition/event
Catriona Harris: Royal Society of Edinburgh Start-up Science Masterclass (18/5/2019)

30 S1 and S2 students from across Fife, Edinburgh and Central Scotland attended an RSE masterclass in biology as part of a series of classes being hosted at the University. Students circulated around four different activities. Description
Keywords: equal gender balance of participants, mostly Scottish participants, public engagement, secondary school, widening access
24/4/2019 
Participation in or organising a public festival/exhibition/event
Catriona Harris: First Chances event - School of Computer Science and School of Mathematics and Statistics (24/4/2019)

CREEM ran a marine mammal photo-ID and mark-recapture activity as part of a First Chances event for S1 and S2 students from local schoolsDescription
Keywords: equal gender balance of participants, mostly Scottish participants, secondary school, widening access
24/4/2019 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: First Chances event - School of Computer Science and School of Mathematics and Statistics (24/4/2019)

CREEM ran a marine mammal photo-ID and mark-recapture activity as part of a First Chances event for S1 and S2 pupils from local schools.Description
Keywords: equal gender balance of participants, mostly Scottish participants, secondary school, widening access
22/3/2019 
Presentation
Sonja Heinrich: Antarctic Expedition Education Programme 2019 (22/3/2019 - 31/3/2019)

Lecturer & guide for Oceanwide Expeditions aboard MV Plancius during the Antarctic Whale Safari& organiser of the seventh St Andrews Students in the Antarctic expedition (https://synergy.st-andrews.ac.uk/antarctic/category/antarctic-expedition-2019/)Description
19/3/2019 
Participation in or organising a public festival/exhibition/event
Catriona Harris: Visit to Strathkinness Primary School to talk about marine pollution (19/3/2019)

Delivered a talk and some hands-on activities to p6/7 on noise as a marine pollutant as part of their marine pollution topic.Description
Keywords: equal gender balance of participants, mostly Scottish participants, primary school, public engagement
18/3/2019 
18/3/2019 
Presentation
Katherine Whyte: School of Biology Postgraduate Conference 2019 (18/3/2019 - 19/3/2019)

Poster presentation: "Seal movement during offshore wind farm construction: do seals respond to pile driving noise?"Description
15/3/2019 
Participation in or organising a workshop, seminar, course
Sonja Heinrich: Expert workshop on Chilean dolphin bycatch (15/3/2019)

14/3/2019 
Other
Joanna Kershaw: Guest Lecturer - Population Biology (BL5103) (14/3/2019)

Lecture on Marine Mammal Health for MSc students as part of their Population Biology moduleDescription
13/3/2019 
Participation in or organising a public festival/exhibition/event
Catriona Harris: Science Night with Strathkinness Beaver Scouts (13/3/2019)

Participated in a science night as part of British Science Week to help the Beaver Scouts work towards their Science BadgeDescription
Keywords: equal gender balance of participants, mostly Scottish participants, primary school, public engagement
9/3/2019 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: Science Discovery Day 2019 (9/3/2019)

"Become a marine mammal scientist!"

Researchers from the Sea Mammal Research Unit (SMRU) ran drop-in activities at the St Andrews Science Discovery Day. We had activities on the photo-identification of marine mammals and a humpback whale song game.Description
Keywords: equal gender balance of participants, public engagement, mostly Scottish participants
26/2/2019 
6/2/2019 
2/2/2019 
Participation in or organising a public festival/exhibition/event
Catriona Harris: Life without a wolf (2/2/2019)

This was Music Planet Event and involved an afternoon of talks and hands-on activities exploring the research into endangered and threatened species followed by an evening concert. CREEM researchers ran a table of hands-on activities.Description
Keywords: equal gender balance of participants, mostly Scottish participants, public engagement
2/2/2019 
Participation in or organising a public festival/exhibition/event
Katherine Whyte: Life without a wolf (2/2/2019)

This was Music Planet Event and involved an afternoon of talks and hands-on activities exploring research into endangered and threatened species followed by an evening concert.

SMRU researchers ran table-top activities on the Harbour Seal Decline Project, and some of the methods used to monitor seal populations in the UK (photoID, diet analysis, biologging).Description
Keywords: equal gender balance of participants, mostly Scottish participants, public engagement, secondary school, primary school
2/2/2019 
Participation in or organising a public festival/exhibition/event
Danielle Harris: Life without a wolf (2/2/2019)

This was a Music Planet Event and involved an afternoon of talks and hands-on activities exploring the research into endangered and threatened species followed by an evening concert. CREEM researchers ran a table of hands-on activities.Description
28/1/2019 
Visiting an external academic institution
Joanna Kershaw: University of Liverpool, Liverpool (28/1/2019 - 2/2/2019)

Working with collaborators at the University of Liverpool as part of the ARISE, Changing Arctic Oceans project funded by NERC. Description
26/1/2019 
Presentation
Katherine Whyte: UKIRSC of the Society for Marine Mammalogy Conference 2019 (26/1/2019)

Oral presentation: "Behavioural responses of seals to pile driving during offshore wind farm construction”Description
24/1/2019 
Participation in or organising a conference
Katherine Whyte: 13th Annual Conference of the UKIRSC of the Society for Marine Mammalogy (24/1/2019 - 26/1/2019)

13th Annual Conference of the UK and Ireland Regional Student Chapter (UKIRSC) of the Society for Marine Mammalogy (SMM)Description
2019 
Other external non-academic engagement
Luke Rendell: Dundee waterfront Tay whale sculpture selection committee (2019)

Multiple engagements with planning process for high visibility waterfront park based around a whale sculpture. I was on the selection committee and our group will be involved in building audio interactive aspects of the park designDescription

Bioinformatics Publications

St Andrews Bioinformatics Unit: activities

0 recent activities (from 0 available) for St Andrews Bioinformatics Unit